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  5. Sacu_v1.1_s0189.g025197

Sacu_v1.1_s0189.g025197


Description : not classified & original description: CDS=167-907


Gene families : OG0000119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0189.g025197
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene13117.t1 Aspi01Gene13117 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67953.t1 Aspi01Gene67953 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009713 No alias not classified & original description: CDS=1-567 0.03 OrthoFinder output from all 47 species
Sam_g00966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!