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  5. Sacu_v1.1_s0187.g025125

Sacu_v1.1_s0187.g025125 (TIC40, ATTIC40, PDE120)


Aliases : TIC40, ATTIC40, PDE120

Description : component *(Tic40) of inner envelope TIC translocation system & original description: CDS=447-1808


Gene families : OG0004334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0187.g025125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00175860 TIC40, ATTIC40,... Protein translocation.chloroplast.inner envelope TIC... 0.04 OrthoFinder output from all 47 species
Aev_g02390 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ala_g05887 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
LOC_Os04g35900.1 TIC40, ATTIC40,... component Tic40 of inner envelope TIC translocation system 0.02 OrthoFinder output from all 47 species
Len_g12504 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Pnu_g13431 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Solyc11g020300.2.1 TIC40, ATTIC40,... component Tic40 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
Spa_g08190 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.09 OrthoFinder output from all 47 species
Spa_g18919 TIC40, ATTIC40, PDE120 component *(Tic40) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Zm00001e008048_P001 TIC40, ATTIC40,... component Tic40 of inner envelope TIC translocation system 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR041243 STI1/HOP_DP 390 440
No external refs found!