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  5. Sacu_v1.1_s0186.g025065

Sacu_v1.1_s0186.g025065


Description : not classified & original description: CDS=638-2614


Gene families : OG0001680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0186.g025065
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00103330 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G30755 No alias Protein of unknown function (DUF668) 0.03 OrthoFinder output from all 47 species
AT1G34320 No alias Protein of unknown function (DUF668) 0.03 OrthoFinder output from all 47 species
Als_g01916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G002200.1 Ceric.05G002200 not classified & original description: pacid=50578529... 0.04 OrthoFinder output from all 47 species
Ehy_g10034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g65330.1 LOC_Os01g65330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g50220.1 LOC_Os06g50220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g02670.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g44876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc04g081510.4.1 Solyc04g081510 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc06g065460.2.1 Solyc06g065460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g017000.2.1 Solyc11g017000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045927 positive regulation of growth IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021864 DUF3475 137 193
IPR007700 DUF668 388 474
No external refs found!