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  5. Sacu_v1.1_s0183.g024942

Sacu_v1.1_s0183.g024942


Description : not classified & original description: CDS=1-1158


Gene families : OG0002107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002107_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0183.g024942
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Ala_g10944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17250.t1 Aspi01Gene17250 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48135.t1 Aspi01Gene48135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.27G007600.1 Ceric.27G007600 not classified & original description: pacid=50606220... 0.05 OrthoFinder output from all 47 species
Dcu_g40820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01015409001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_05407 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_24690 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g27693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!