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  5. Sacu_v1.1_s0183.g024929

Sacu_v1.1_s0183.g024929 (STI)


Aliases : STI

Description : not classified & original description: CDS=300-2426


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0183.g024929

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00099080 evm_27.TU.AmTr_v1... Protein STICHEL-like 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g15567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13755.t1 STI, Aspi01Gene13755 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35944.t2 STI, Aspi01Gene35944 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G046100.1 STI, Ceric.34G046100 not classified & original description: pacid=50623739... 0.03 OrthoFinder output from all 47 species
Dcu_g05768 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436694g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14718 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61848 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009336 No alias not classified & original description: CDS=2035-3537 0.04 OrthoFinder output from all 47 species
Sam_g40290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo420117 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g102810.3.1 STI, Solyc01g102810 Protein STICHEL OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc02g072090.2.1 Solyc02g072090 Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 516 577
No external refs found!