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  5. Sacu_v1.1_s0182.g024899

Sacu_v1.1_s0182.g024899


Description : not classified & original description: CDS=928-2679


Gene families : OG0002935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0182.g024899
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aev_g03233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20835 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g46058 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G060000.1 Ceric.27G060000 not classified & original description: pacid=50605958... 0.02 OrthoFinder output from all 47 species
Ceric.38G025100.1 Ceric.38G025100 not classified & original description: pacid=50580393... 0.03 OrthoFinder output from all 47 species
Ehy_g17887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09694 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048478 replication fork protection IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA

No InterPro domains available for this sequence

No external refs found!