1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0181.g024848

Sacu_v1.1_s0181.g024848


Description : not classified & original description: CDS=93-2615


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0181.g024848

Target Alias Description ECC score Gene Family Method Actions
Adi_g008163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025128 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061004 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g074702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g129391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40924.t1 Aspi01Gene40924 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.06 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.04 OrthoFinder output from all 47 species
Dac_g07091 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021389001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01030121001 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00263 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g08670.1 LOC_Os09g08670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_60376g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_768428g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g26326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g39958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g071180.3.1 Solyc02g071180 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc03g005750.3.1 Solyc03g005750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g045230.4.1 Solyc07g045230 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g46247 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e022213_P003 Zm00001e022213 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e032451_P001 Zm00001e032451 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 24 83
No external refs found!