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  5. Sacu_v1.1_s0181.g024837

Sacu_v1.1_s0181.g024837


Description : not classified & original description: CDS=1-2619


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0181.g024837
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Dcu_g07174 No alias regulatory protein *(RLD) of gravity sensing & original... 0.02 OrthoFinder output from all 47 species
Gb_13554 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Pir_g10951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006658 phosphatidylserine metabolic process IEP HCCA
BP GO:0006659 phosphatidylserine biosynthetic process IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0106245 L-serine-phosphatidylethanolamine phosphatidyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 419 485
IPR027988 BRX_N 669 696
IPR000408 Reg_chr_condens 199 247
IPR000408 Reg_chr_condens 314 363
IPR000408 Reg_chr_condens 92 140
IPR000408 Reg_chr_condens 262 311
IPR000408 Reg_chr_condens 368 415
IPR000408 Reg_chr_condens 143 194
IPR013591 Brevis_radix_dom 808 862
No external refs found!