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  5. Sacu_v1.1_s0178.g024671

Sacu_v1.1_s0178.g024671


Description : not classified & original description: CDS=409-2136


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0178.g024671
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT3G46110 No alias Domain of unknown function (DUF966) 0.03 OrthoFinder output from all 47 species
Adi_g060813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07432 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19661.t1 Aspi01Gene19661 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G003700.1 Ceric.01G003700 not classified & original description: pacid=50590972... 0.03 OrthoFinder output from all 47 species
Ceric.10G058400.1 Ceric.10G058400 not classified & original description: pacid=50611779... 0.04 OrthoFinder output from all 47 species
Ceric.14G059700.1 Ceric.14G059700 not classified & original description: pacid=50633215... 0.02 OrthoFinder output from all 47 species
Dac_g16699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_35177 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g57020.1 LOC_Os01g57020 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g74370.1 LOC_Os01g74370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g48600.1 LOC_Os03g48600 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44760.1 LOC_Os08g44760 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g13130.1 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g14472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48516 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39402 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g48272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000820_P002 Zm00001e000820 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e019641_P005 Zm00001e019641 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
InterPro domains Description Start Stop
IPR010369 SOK 8 375
No external refs found!