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  5. Sacu_v1.1_s0177.g024623

Sacu_v1.1_s0177.g024623


Description : not classified & original description: CDS=1-423


Gene families : OG0001479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001479_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0177.g024623
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0046.g030163 No alias not classified & original description: CDS=1-261 0.01 OrthoFinder output from all 47 species
Azfi_s0084.g039014 No alias not classified & original description: CDS=1-366 0.01 OrthoFinder output from all 47 species
Azfi_s0141.g051333 No alias not classified & original description: CDS=1-435 0.03 OrthoFinder output from all 47 species
Azfi_s0158.g053916 No alias not classified & original description: CDS=1-708 0.02 OrthoFinder output from all 47 species
Azfi_s0200.g057539 No alias not classified & original description: CDS=1-480 0.01 OrthoFinder output from all 47 species
Azfi_s0213.g058236 No alias not classified & original description: CDS=1-1527 0.01 OrthoFinder output from all 47 species
Azfi_s0333.g065445 No alias not classified & original description: CDS=1-519 0.01 OrthoFinder output from all 47 species
Azfi_s0649.g080913 No alias not classified & original description: CDS=1-399 0.02 OrthoFinder output from all 47 species
Azfi_s0788.g087110 No alias not classified & original description: CDS=1-513 0.03 OrthoFinder output from all 47 species
Azfi_s0861.g090071 No alias not classified & original description: CDS=1-708 0.03 OrthoFinder output from all 47 species
Azfi_s1518.g103972 No alias not classified & original description: CDS=1-726 0.01 OrthoFinder output from all 47 species
Ceric.20G037500.1 Ceric.20G037500 not classified & original description: pacid=50565891... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000794 No alias not classified & original description: CDS=1-378 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007044 No alias not classified & original description: CDS=1-792 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009205 No alias not classified & original description: CDS=1-390 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012939 No alias not classified & original description: CDS=1-561 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014182 No alias not classified & original description: CDS=1-1209 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018399 No alias not classified & original description: CDS=1-456 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018445 No alias not classified & original description: CDS=1-456 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0145.g023027 No alias not classified & original description: CDS=1-504 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s2340.g028317 No alias not classified & original description: CDS=1-429 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s3054.g028586 No alias not classified & original description: CDS=1-480 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!