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  5. Sacu_v1.1_s0171.g024402

Sacu_v1.1_s0171.g024402


Description : not classified & original description: CDS=118-555


Gene families : OG0000447 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000447_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0171.g024402
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT1G13000 No alias Protein of unknown function (DUF707) 0.02 OrthoFinder output from all 47 species
Aspi01Gene39870.t1 Aspi01Gene39870 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03145 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g19889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e022627_P005 Zm00001e022627 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006359 regulation of transcription by RNA polymerase III IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA

No InterPro domains available for this sequence

No external refs found!