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  5. Sacu_v1.1_s0170.g024337

Sacu_v1.1_s0170.g024337


Description : fucosyl transferase (ESMD) involved in pectin-dependent cell adhesion & original description: CDS=402-2141


Gene families : OG0002012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002012_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0170.g024337

Target Alias Description ECC score Gene Family Method Actions
Sam_g13780 No alias fucosyl transferase (ESMD) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Spa_g04452 No alias fucosyl transferase (ESMD) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 160 490
No external refs found!