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  5. Sacu_v1.1_s0169.g024330

Sacu_v1.1_s0169.g024330


Description : actin stability factor *(PMI1) & original description: CDS=282-3653


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0169.g024330

Target Alias Description ECC score Gene Family Method Actions
AT1G42550 PMI1 plastid movement impaired1 0.03 OrthoFinder output from all 47 species
Aop_g12878 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00292.t1 Aspi01Gene00292 actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46917.t1 Aspi01Gene46917 actin stability co-factor *(PMIR) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g38090.1 PMI1, LOC_Os09g38090 actin stability factor (PMI1/PMI15) 0.02 OrthoFinder output from all 47 species
MA_466570g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e031409_P001 Zm00001e031409 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP HCCA
CC GO:0000178 exosome (RNase complex) IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 186 333
No external refs found!