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Description : component *(Symplekin/Pta1) of Cleavage and Polyadenylation Specificity Factor (CPSF) complex & original description: CDS=306-4187
Gene families : OG0002204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002204_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00007p00088050 | ESP4,... | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G27595 | No alias | CONTAINS InterPro DOMAIN/s: Symplekin tight junction... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G01400 | ESP4 | HEAT repeat-containing protein | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g081403 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04192 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g04252 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.09 | OrthoFinder output from all 47 species | |
| Ala_g06408 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g09476 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23718 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g63126 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g08267 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene50297.t1 | Aspi01Gene50297 | component *(Symplekin/Pta1) of Cleavage and... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007850 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G050700.1 | Ceric.01G050700 | component *(Symplekin/Pta1) of Cleavage and... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.12G019100.1 | ESP4, Ceric.12G019100 | component *(Symplekin/Pta1) of Cleavage and... | 0.07 | OrthoFinder output from all 47 species | |
| Dac_g01061 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02040 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g04949 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g21797 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01009244001 | No alias | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01011157001 | ESP4 | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_23976 | ESP4 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g49940.1 | LOC_Os01g49940 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g49320.1 | ESP4, LOC_Os07g49320 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14162 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g19439 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06265 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10426054g0010 | No alias | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10426054g0020 | ESP4 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10430259g0010 | No alias | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432378g0010 | No alias | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Mp6g03410.1 | No alias | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14027 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g24896 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g27266 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g22861 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g15043 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Smo442688 | ESP4 | RNA processing.RNA 3-end polyadenylation.Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g076910.3.1 | Solyc04g076910 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g005330.3.1 | ESP4, Solyc09g005330 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g18107 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03552 | No alias | component *(Symplekin/Pta1) of Cleavage and... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06134 | ESP4 | component *(Symplekin/Pta1) of Cleavage and... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e020082_P004 | Zm00001e020082 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e035946_P001 | ESP4, Zm00001e035946 | component Symplekin/Pta1 of Cleavage and Polyadenylation... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005875 | microtubule associated complex | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008134 | transcription factor binding | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008569 | minus-end-directed microtubule motor activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0017025 | TBP-class protein binding | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | HCCA |
| CC | GO:0030286 | dynein complex | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| BP | GO:0042254 | ribosome biogenesis | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0044085 | cellular component biogenesis | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | HCCA |
| No external refs found! |