Solyc10g009550.3.1 (Solyc10g009550.3)


Aliases : Solyc10g009550.3

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group III WRKY DNA-binding protein 30 (WRKY30)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g009550.3.1
Cluster HCCA cluster: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AT1G29860 ATWRKY71, WRKY71 WRKY DNA-binding protein 71 0.04 Gene family
AT1G66550 WRKY67, ATWRKY67 WRKY DNA-binding protein 67 0.04 Gene family
AT1G68150 WRKY9, ATWRKY9 WRKY DNA-binding protein 9 0.02 Gene family
AT2G46400 WRKY46, ATWRKY46 WRKY DNA-binding protein 46 0.03 Gene family
AT3G56400 ATWRKY70, WRKY70 WRKY DNA-binding protein 70 0.02 Gene family
AT4G11070 AtWRKY41, WRKY41 WRKY family transcription factor 0.03 Gene family
AT4G18170 WRKY28, ATWRKY28 WRKY DNA-binding protein 28 0.02 Gene family
AT4G31550 ATWRKY11, WRKY11 WRKY DNA-binding protein 11 0.03 Gene family
AT4G31800 WRKY18, ATWRKY18 WRKY DNA-binding protein 18 0.03 Gene family
AT5G01900 WRKY62, ATWRKY62 WRKY DNA-binding protein 62 0.02 Gene family
AT5G13080 WRKY75, ATWRKY75 WRKY DNA-binding protein 75 0.02 Gene family
AT5G24110 ATWRKY30, WRKY30 WRKY DNA-binding protein 30 0.03 Gene family
AT5G41570 ATWRKY24, WRKY24 WRKY DNA-binding protein 24 0.02 Gene family
AT5G64810 ATWRKY51, WRKY51 WRKY DNA-binding protein 51 0.05 Gene family
GSVIVT01024624001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01028718001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01028823001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01029265001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01032661001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
GSVIVT01035885001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os01g08710 Os01g0182700 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
MA_10433300g0020 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.07 Gene family
MA_212937g0010 No alias No description available 0.02 Gene family
MA_23415g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_38938g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
MA_74833g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc01g104550.3.1 Solyc01g104550.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc02g067430.3.1 Solyc02g067430.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc04g078550.3.1 Solyc04g078550.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc06g068460.3.1 Solyc06g068460.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc08g006320.3.1 Solyc08g006320.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc08g008280.3.1 Solyc08g008280.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc09g014990.3.1 Solyc09g014990.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d004086 GRMZM2G102583 27.3.32 RNA.regulation of transcription.WRKY domain... 0.06 Gene family
Zm00001d011133 GRMZM2G137802 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d012482 GRMZM2G036703 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d016052 GRMZM2G048450 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d037054 GRMZM2G156529 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d050247 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d053369 GRMZM2G038158 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 99 159
No external refs found!