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  5. Sacu_v1.1_s0167.g024215

Sacu_v1.1_s0167.g024215


Description : Globulin-type seed storage protein *(CR) & original description: CDS=219-1658


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0167.g024215
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030613001 No alias Glutelin type-D 1 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Ore_g28500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36633 No alias Globulin-type seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 94 252
IPR006045 Cupin_1 316 452
No external refs found!