Sacu_v1.1_s0166.g024159 (ACBP4)

Aliases : ACBP4

Description : component *(CAF) of CRS2-CAF plastidial RNA splicing factor complexes & original description: CDS=96-4676

Gene families : OG0001589 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001589_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0166.g024159
Cluster	HCCA: Cluster_34

Target	Alias	Description	ECC score	Gene Family Method
Aob_g04451	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g27567	ACBP4	acyl-CoA-binding protein *(ACBP4/5) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g07652	ACBP4	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000062	fatty-acyl-CoA binding	IEA	Interproscan
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0008289	lipid binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0033218	amide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0120227	acyl-CoA binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
MF	GO:1901567	fatty acid derivative binding	None	Extended
MF	GO:1901681	sulfur compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011498	Kelch_2	1151	1197
IPR006652	Kelch_1	1044	1085
IPR000582	Acyl-CoA-binding_protein	897	958
IPR001890	RNA-binding_CRM	727	822
IPR001890	RNA-binding_CRM	609	692

External Links

No external refs found!