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  5. Sacu_v1.1_s0165.g024126

Sacu_v1.1_s0165.g024126


Description : UMF23-type solute transporter & original description: CDS=1-1722


Gene families : OG0000069 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0165.g024126
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene02263.t1 Aspi01Gene02263 UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15101 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16515 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17735 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g56493 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03438 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16741 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g58234 No alias UMF23-type solute transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28803 No alias UMF23-type solute transporter & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14708 No alias UMF23-type solute transporter & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR010658 Nodulin-like 30 289
No external refs found!