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  5. Sacu_v1.1_s0165.g024082

Sacu_v1.1_s0165.g024082


Description : not classified & original description: CDS=1-201


Gene families : OG0000039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0165.g024082
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Adi_g059769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36314 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene02415.t1 Aspi01Gene02415 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15592.t1 Aspi01Gene15592 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17352.t1 Aspi01Gene17352 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33430.t1 Aspi01Gene33430 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene48175.t1 CP24, LHCB6,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene48518.t1 Aspi01Gene48518 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50109.t1 Aspi01Gene50109 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58286.t1 Aspi01Gene58286 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59473.t1 Aspi01Gene59473 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65251.t1 Aspi01Gene65251 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001915 No alias not classified & original description: CDS=1-486 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011886 No alias not classified & original description: CDS=1-297 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014120 No alias not classified & original description: CDS=1-411 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0287.g027153 No alias not classified & original description: CDS=1-489 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!