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  5. Sacu_v1.1_s0164.g024054

Sacu_v1.1_s0164.g024054


Description : not classified & original description: CDS=1-468


Gene families : OG0000956 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000956_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0164.g024054
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Dcu_g09862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014100 No alias not classified & original description: CDS=1-492 0.05 OrthoFinder output from all 47 species
Sam_g06621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g076690.4.1 Solyc06g076690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g14966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e042018_P001 Zm00001e042018 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR006683 Thioestr_dom 67 138
No external refs found!