Solyc10g009360.3.1 (Solyc10g009360.3)


Aliases : Solyc10g009360.3

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family encodes a protein containing Dof zinc finger motifs. expression is limited to vascular system of the mother plant. recessive mutation is inherited as maternal-effect and expression is not detected in the embryo. mutants are defective in seed germination. mutants are more dependent on light and cold treatment and less sensitive to gibberellin during seed germination. DOF AFFECTING GERMINATION 2 (DAG2)


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g009360.3.1
Cluster HCCA cluster: Cluster_292

Target Alias Description ECC score Gene Family Method Actions
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT2G46590 DAG2 Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT3G52440 No alias Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT3G55370 OBP3 OBF-binding protein 3 0.03 Gene family
AT3G61850 DAG1 Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.05 Gene family
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.03 Gene family
GSVIVT01008156001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01021085001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
GSVIVT01021086001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01025119001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.06 Gene family
LOC_Os02g47810 Os02g0707200 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os03g42200 Os03g0619001,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os03g55610 Os03g0764900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os04g58190 Os04g0678400 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_16692g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_7537g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Smo29617 PACid_15412310 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Smo89924 PACid_15413201 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc02g065290.1.1 Solyc02g065290.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Solyc03g115940.3.1 Solyc03g115940.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc05g054510.2.1 Solyc05g054510.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc06g005130.3.1 Solyc06g005130.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc06g071480.3.1 Solyc06g071480.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Solyc06g075370.3.1 Solyc06g075370.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc09g010680.3.1 Solyc09g010680.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc11g072500.2.1 Solyc11g072500.2 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.07 Gene family
Zm00001d021591 GRMZM2G134545,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d030727 GRMZM2G123900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d033325 GRMZM2G045678 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d034163 GRMZM2G108865 16.5.1.2.3 secondary... 0.04 Gene family
Zm00001d034651 GRMZM2G017470 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d038281 GRMZM2G371058 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d041549 GRMZM2G176063 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 45 102
No external refs found!