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  5. Sacu_v1.1_s0160.g023894

Sacu_v1.1_s0160.g023894 (MGP)


Aliases : MGP

Description : C2H2 subclass IDD transcription factor & original description: CDS=378-2270


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0160.g023894
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Aob_g37976 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g08574 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01025166001 JKD RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
MA_9866844g0010 IDD2, AtIDD2 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Mp5g20530.1 MGP C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Nbi_g03822 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!