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  5. Ehy_g07403

Ehy_g07403


Description : component *(uS5) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g07403
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
Adi_g075066 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ala_g07831 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_158470g0010 No alias component RPS2 of SSU proteome 0.04 OrthoFinder output from all 47 species
Mp5g15970.1 No alias component RPS2 of SSU proteome 0.02 OrthoFinder output from all 47 species
Nbi_g03516 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020670 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g08630 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g40249 No alias component *(uS5) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR005324 Ribosomal_S5_C 176 248
IPR013810 Ribosomal_S5_N 92 156
No external refs found!