Ehy_g07391 (EMB2296)

Aliases : EMB2296

Description : component *(uL2) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000222 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000222_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ehy_g07391
Cluster	HCCA: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00109050	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder output from all 39 species
AT2G18020	EMB2296	Ribosomal protein L2 family	0.01	OrthoFinder output from all 39 species
Aob_g33588	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Aop_g12168	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Cba_g55145	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Dac_g02131	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Dcu_g05184	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
LOC_Os12g38000.1	LOC_Os12g38000	component RPL8 of LSU proteome component	0.01	OrthoFinder output from all 39 species
Len_g40108	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 39 species
Lfl_g24495	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
MA_307029g0010	No alias	component RPL8 of LSU proteome component	0.01	OrthoFinder output from all 39 species
Mp7g01860.1	EMB2296	component RPL8 of LSU proteome component	0.01	OrthoFinder output from all 39 species
Mp7g08730.1	EMB2296	component RPL8 of LSU proteome component	0.01	OrthoFinder output from all 39 species
Msp_g07633	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 39 species
Ppi_g18030	EMB2296	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Sacu_v1.1_s0019.g007901	MK1, MKK2, ATMKK2	EC_2.7 transferase transferring phosphorus-containing...	0.01	OrthoFinder output from all 39 species
Solyc07g063890.2.1	Solyc07g063890	component RPL8 of LSU proteome component	0.01	OrthoFinder output from all 39 species
Solyc12g005330.2.1	Solyc12g005330	component RPL8 of LSU proteome component	0.01	OrthoFinder output from all 39 species
Tin_g00494	No alias	component *(uL2) of large ribosomal-subunit (LSU)...	0.01	OrthoFinder output from all 39 species
Tin_g29622	No alias	not classified & original description: none	0.01	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004019	adenylosuccinate synthase activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006354	DNA-templated transcription elongation	IEP	HCCA
BP	GO:0006368	transcription elongation by RNA polymerase II	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
CC	GO:0008023	transcription elongation factor complex	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
CC	GO:0016593	Cdc73/Paf1 complex	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0036297	interstrand cross-link repair	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
CC	GO:0043240	Fanconi anaemia nuclear complex	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022666	Rbsml_prot_L2_RNA-bd_dom	13	89
IPR022669	Ribosomal_L2_C	98	225

External Links

No external refs found!

Ehy_g07391 (EMB2296)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation