Aliases : EMB2296
Description : component *(uL2) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0000222 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000222_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ehy_g07391 | |
Cluster | HCCA: Cluster_32 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00109050 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 39 species | |
AT2G18020 | EMB2296 | Ribosomal protein L2 family | 0.01 | OrthoFinder output from all 39 species | |
Aob_g33588 | No alias | component *(uL2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
Aop_g12168 | No alias | component *(uL2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
Cba_g55145 | No alias | component *(uL2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
Dac_g02131 | No alias | component *(uL2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
Dcu_g05184 | No alias | component *(uL2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
LOC_Os12g38000.1 | LOC_Os12g38000 | component RPL8 of LSU proteome component | 0.01 | OrthoFinder output from all 39 species | |
Len_g40108 | No alias | component *(uL2) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
Lfl_g24495 | No alias | component *(uL2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
MA_307029g0010 | No alias | component RPL8 of LSU proteome component | 0.01 | OrthoFinder output from all 39 species | |
Mp7g01860.1 | EMB2296 | component RPL8 of LSU proteome component | 0.01 | OrthoFinder output from all 39 species | |
Mp7g08730.1 | EMB2296 | component RPL8 of LSU proteome component | 0.01 | OrthoFinder output from all 39 species | |
Msp_g07633 | No alias | component *(uL2) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 39 species | |
Ppi_g18030 | EMB2296 | component *(uL2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
Sacu_v1.1_s0019.g007901 | MK1, MKK2, ATMKK2 | EC_2.7 transferase transferring phosphorus-containing... | 0.01 | OrthoFinder output from all 39 species | |
Solyc07g063890.2.1 | Solyc07g063890 | component RPL8 of LSU proteome component | 0.01 | OrthoFinder output from all 39 species | |
Solyc12g005330.2.1 | Solyc12g005330 | component RPL8 of LSU proteome component | 0.01 | OrthoFinder output from all 39 species | |
Tin_g00494 | No alias | component *(uL2) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
Tin_g29622 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 39 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004019 | adenylosuccinate synthase activity | IEP | HCCA |
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
BP | GO:0006368 | transcription elongation by RNA polymerase II | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
CC | GO:0008023 | transcription elongation factor complex | IEP | HCCA |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016311 | dephosphorylation | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
CC | GO:0016593 | Cdc73/Paf1 complex | IEP | HCCA |
MF | GO:0016791 | phosphatase activity | IEP | HCCA |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
BP | GO:0036297 | interstrand cross-link repair | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043240 | Fanconi anaemia nuclear complex | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |