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  5. Sacu_v1.1_s0155.g023613

Sacu_v1.1_s0155.g023613 (AtCRT1a, CRT1a, CRT1)


Aliases : AtCRT1a, CRT1a, CRT1

Description : ER luminal lectin chaperone *(CRT) & original description: CDS=114-1322


Gene families : OG0000812 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0155.g023613
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Dac_g13121 AtCRT1a, CRT1a, CRT1 ER luminal lectin chaperone *(CRT) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18966 PIP5K9 EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g39878 No alias ER luminal lectin chaperone *(CRT) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18341 AtCRT3, EBS2, CRT3, PSL1 component *(CRT3) of ER luminal chaperone complex &... 0.03 OrthoFinder output from all 47 species
Tin_g14035 AtCRT1a, CRT1a, CRT1 ER luminal lecTin chaperone *(CRT) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0005783 endoplasmic reticulum IEA Interproscan
BP GO:0006457 protein folding IEA Interproscan
MF GO:0051082 unfolded protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001580 Calret/calnex 267 340
IPR001580 Calret/calnex 30 265
No external refs found!