Solyc10g009070.3.1 (Solyc10g009070.3)


Aliases : Solyc10g009070.3

Description : 29.2.2.2.1 protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases hydrolases, acting on acid anhydrides, in phosphorus-containing anhydridesATP-dependent helicasesnucleic acid bindingATP bindingRNA bindinghelicases


Gene families : OG_01_0005924 (Gene family) Phylogenetic Tree(s): OG0005924_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g009070.3.1
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT1G77030 No alias hydrolases, acting on acid anhydrides, in... 0.05 Gene family
Cre12.g513701 No alias 29.2.2.3.5 protein.synthesis.ribosome... 0.07 Gene family
GSVIVT01009983001 No alias 29.2.2.2.1 protein.synthesis.ribosome... 0.05 Gene family
LOC_Os08g32090 Os08g0416100 29.2.2.3.5 protein.synthesis.ribosome... 0.03 Gene family
Zm00001d050315 No alias 29.2.2.2.1 protein.synthesis.ribosome... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
MF GO:0004004 ATP-dependent RNA helicase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 48 215
IPR012541 DBP10_C 624 685
IPR001650 Helicase_C 252 362
No external refs found!