Sacu_v1.1_s0152.g023465


Description : not classified & original description: CDS=1-1044


Gene families : OG0000815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0152.g023465
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00165550 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g31538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17146.t1 Aspi01Gene17146 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18000.t1 Aspi01Gene18000 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44143.t1 Aspi01Gene44143 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003863001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01007791001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_19815 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os02g42470.1 LOC_Os02g42470 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g47140.2 LOC_Os04g47140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_68645g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_80489g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g11075 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19862 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016721 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Spa_g48918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015798_P001 Zm00001e015798 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030876_P001 Zm00001e030876 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA

No InterPro domains available for this sequence

No external refs found!