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  5. Sacu_v1.1_s0150.g023339

Sacu_v1.1_s0150.g023339


Description : PLATZ-type transcription factor & original description: CDS=1-1545


Gene families : OG0000228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0150.g023339
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Ala_g21703 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13991.t1 Aspi01Gene13991 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13991.t2 Aspi01Gene13991 PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63298.t1 Aspi01Gene63298 PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013621 No alias PLATZ-type transcription factor & original description: CDS=1-465 0.04 OrthoFinder output from all 47 species
Ehy_g00770 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01004782001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.02 OrthoFinder output from all 47 species
GSVIVT01012125001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
GSVIVT01031446001 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.03 OrthoFinder output from all 47 species
Gb_01198 No alias transcription factor (PLATZ) 0.01 OrthoFinder output from all 47 species
Gb_32018 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
LOC_Os02g46610.1 LOC_Os02g46610 transcription factor (PLATZ) 0.05 OrthoFinder output from all 47 species
Lfl_g16678 No alias PLATZ-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_12209g0020 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
MA_9760264g0010 No alias transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Ore_g32630 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41201 No alias PLATZ-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10046 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g27974 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025441 No alias not classified & original description: CDS=1-1005 0.04 OrthoFinder output from all 47 species
Smo425306 No alias RNA biosynthesis.transcriptional activation.PLATZ... 0.06 OrthoFinder output from all 47 species
Solyc08g005100.3.1 Solyc08g005100 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Tin_g09888 No alias PLATZ-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007100_P003 Zm00001e007100 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Zm00001e013865_P001 Zm00001e013865 transcription factor (PLATZ) 0.03 OrthoFinder output from all 47 species
Zm00001e023272_P001 Zm00001e023272 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species
Zm00001e037743_P001 Zm00001e037743 transcription factor (PLATZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
InterPro domains Description Start Stop
IPR006734 PLATZ 171 242
No external refs found!