1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0149.g023255

Sacu_v1.1_s0149.g023255


Description : regulatory protein (CIB) of blue light perception & original description: CDS=709-2448


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0149.g023255
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Als_g30860 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene46685.t1 Aspi01Gene46685 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62580.t1 Aspi01Gene62580 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009357001 RSL2 RNA biosynthesis.transcriptional activation.bHLH... 0.01 OrthoFinder output from all 47 species
Mp3g11900.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Mp6g18480.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Ore_g19414 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo419388 RSL2 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Solyc04g077480.3.1 Solyc04g077480 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e010540_P001 Zm00001e010540 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 429 476
No external refs found!