Sacu_v1.1_s0148.g023247 (EST3, MRP4, ATMRP4, ABCC4)

Aliases : EST3, MRP4, ATMRP4, ABCC4

Description : subfamily ABCC transporter & original description: CDS=228-4094

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0148.g023247

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00149p00037740	MRP9, ABCC9,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Adi_g009809	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g056548	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g33144	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g09219	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g22920	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g10913	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene22437.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene26287.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene26411.t1	EST3, MRP4,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene45971.t1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene64199.t1	MRP10, ATMRP10,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07486	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g38812	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g74175	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.18G065700.1	EST3, MRP4,...	subfamily ABCC transporter & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.39G052600.1	ATMRP12, MRP12,...	not classified & original description: pacid=50583469...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000718.3	ATMRP8, MRP8, ABCC6	ABC transporter C family member 6 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001729.6	ABCC1, ATABCC1,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Dac_g39648	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g02029	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10363	ABCC12, MRP13, ATMRP13	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01019469001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
LOC_Os04g13210.1	MRP10, ATMRP10,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Len_g10742	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10431617g0010	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp4g15590.1	ATMRP14, ABCC10, MRP14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp5g13190.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp5g13230.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp7g13860.1	AtABCC2, ABCC2,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Nbi_g24428	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g29525	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g32692	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g56076	AtABCC2, ABCC2,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=1-2715	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001693	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=1-1395	0.05	OrthoFinder output from all 47 species
Sam_g27892	No alias	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g50141	No alias	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo107555	MRP15, ABCC15, ATMRP15	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo417771	ATMRP12, MRP12, ABCC11	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc09g075020.3.1	EST3, MRP4,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Tin_g45911	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e038918_P002	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEP	HCCA
MF	GO:0004097	catechol oxidase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0016197	endosomal transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
CC	GO:0036452	ESCRT complex	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0071985	multivesicular body sorting pathway	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	1002	1242
IPR011527	ABC1_TM_dom	346	601
IPR003439	ABC_transporter-like_ATP-bd	670	802

External Links

No external refs found!

Sacu_v1.1_s0148.g023247 (EST3, MRP4, ATMRP4, ABCC4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation