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  5. Sacu_v1.1_s0148.g023235

Sacu_v1.1_s0148.g023235


Description : Trihelix-type transcription factor & original description: CDS=1-885


Gene families : OG0002113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0148.g023235
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Adi_g069214 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g096869 FIP2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40964.t1 FIP2, Aspi01Gene40964 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G042100.1 Ceric.24G042100 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g17678 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g45940.1 LOC_Os04g45940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Smo413913 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.02 OrthoFinder output from all 47 species
Zm00001e024316_P001 Zm00001e024316 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 28 112
No external refs found!