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Aliases : PUB26
Description : not classified & original description: CDS=1-1080
Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00030p00159240 | PUB23,... | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00069p00038840 | PUB22,... | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00138p00053700 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 21 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AT3G52450 | PUB22 | plant U-box 22 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g09134 | PUB25 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g15461 | CMPG2, ATCMPG2 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18167 | PUB26 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g38062 | PUB25 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g02187 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g06990 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20026 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g10929 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23643 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33086 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g40105 | PUB26 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g20185 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04412 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18761 | PUB29, ATPUB29 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene18467.t1 | PUB23, Aspi01Gene18467 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene19337.t1 | PUB26, Aspi01Gene19337 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene19350.t1 | PUB26, Aspi01Gene19350 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene19351.t1 | Aspi01Gene19351 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene27391.t1 | PUB26, Aspi01Gene27391 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene51624.t1 | PUB15, Aspi01Gene51624 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g38190 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g78214 | PUB25 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.1Z056500.1 | PUB26, Ceric.1Z056500 | U-Box-group-III E3 ubiquitin ligase & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G081600.1 | PUB26, Ceric.21G081600 | U-Box-group-III E3 ubiquitin ligase & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.27G047700.1 | PUB8, B80,... | E3 ubiquitin ligase *(PUB8) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g00903 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g01521 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07421 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g31575 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g46168 | PUB23 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g01464 | PUB26 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03660 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16036 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011139001 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011140001 | PUB23 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011616001 | CMPG1, ATCMPG1 | U-box domain-containing protein 20 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02628 | No alias | U-box domain-containing protein 21 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_19502 | PUB23 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g64570.1 | PUB23, LOC_Os01g64570 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g34410.1 | PUB25, LOC_Os02g34410 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g50460.1 | LOC_Os02g50460 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g13010.1 | LOC_Os03g13010 | U-box domain-containing protein 75 OS=Oryza sativa... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g13740.1 | LOC_Os03g13740 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g13870.1 | LOC_Os06g13870 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g03440.1 | LOC_Os10g03440 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g06410.1 | PUB24, LOC_Os12g06410 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g31416 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432981g0010 | PUB22 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_126399g0010 | PUB26 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_200041g0010 | PUB25 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Mp2g06090.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g22750.1 | PUB26 | U-box domain-containing protein 26 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g11020.1 | PUB25 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g11599 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g12974 | PUB25 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25593 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g37574 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08920 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g21647 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29206 | PUB25 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03430 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g19356 | PUB26 | U-Box-group-III E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0005.g002717 | PUB26 | not classified & original description: CDS=1-1404 | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g007000.4.1 | PUB22, Solyc01g007000 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g007020.4.1 | PUB23, Solyc01g007020 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g007030.3.1 | PUB22, Solyc01g007030 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g007040.4.1 | PUB22, Solyc01g007040 | E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g007050.3.1 | PUB24, Solyc01g007050 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g107980.3.1 | PUB26, Solyc01g107980 | U-box domain-containing protein 25 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g008100.3.1 | Solyc04g008100 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc04g071030.1.1 | Solyc04g071030 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g074140.1.1 | PUB24, Solyc06g074140 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g005700.1.1 | CMPG2, ATCMPG2,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g006030.1.1 | Solyc11g006030 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g068920.1.1 | PUB23, Solyc11g068920 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g068940.1.1 | PUB24, Solyc11g068940 | E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00706 | PUB23 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47017 | PUB23 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g57248 | PUB29, ATPUB29 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000999_P001 | Zm00001e000999 | U-box domain-containing protein 20 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e014752_P001 | PUB23, Zm00001e014752 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014766_P001 | CMPG2, ATCMPG2,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015763_P001 | Zm00001e015763 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036030_P001 | Zm00001e036030 | U-box domain-containing protein 21 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039417_P001 | PUB23, Zm00001e039417 | E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040854_P001 | CMPG2, ATCMPG2,... | U-box domain-containing protein 29 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |