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  5. Sacu_v1.1_s0147.g023157

Sacu_v1.1_s0147.g023157 (DUO1)


Aliases : DUO1

Description : not classified & original description: CDS=1-480


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0147.g023157

Target Alias Description ECC score Gene Family Method Actions
AT1G56160 ATMYB72, MYB72 myb domain protein 72 0.03 OrthoFinder output from all 47 species
AT5G54230 MYB49, AtMYB49 myb domain protein 49 0.05 OrthoFinder output from all 47 species
Adi_g104203 AtMYB107, MYB107 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04306 AtMYB50, MYB50 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01028984001 AtMYB18, MYB18 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os03g20090.1 BOS1, AtMYB108,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_10427849g0010 AtMYB107, MYB107 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_97537g0010 AtMYB93, MYB93 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g20208 ATMYB102, ATM4, MYB102 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008997_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Zm00001e038356_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 69 109
No external refs found!