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  5. Sacu_v1.1_s0147.g023121

Sacu_v1.1_s0147.g023121 (ATHANSYNAB, ASA2)


Aliases : ATHANSYNAB, ASA2

Description : EC_4.1 carbon-carbon lyase & original description: CDS=1-1812


Gene families : OG0004515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0147.g023121

Target Alias Description ECC score Gene Family Method Actions
Adi_g015098 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37596 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR015890 Chorismate_C 316 587
IPR006805 Anth_synth_I_N 114 254
No external refs found!