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  5. Sacu_v1.1_s0146.g023063

Sacu_v1.1_s0146.g023063


Description : not classified & original description: CDS=111-1286


Gene families : OG0000471 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0146.g023063

Target Alias Description ECC score Gene Family Method Actions
Aev_g24757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69224 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g03140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018311 No alias not classified & original description: CDS=176-1375 0.03 OrthoFinder output from all 47 species
Sam_g13463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
InterPro domains Description Start Stop
IPR005069 Nucl-diP-sugar_transferase 132 330
IPR006747 DUF599 1 143
No external refs found!