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  5. Sacu_v1.1_s0146.g023040

Sacu_v1.1_s0146.g023040 (PUB44, SAUL1, ATPUB44)


Aliases : PUB44, SAUL1, ATPUB44

Description : E3 ubiquitin ligase *(SAUL) & original description: CDS=347-3472


Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0146.g023040
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00145170 PUB44, SAUL1,... Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Adi_g017421 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023614 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57145.t1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70545.t1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0111.g045660 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=666-3779 0.04 OrthoFinder output from all 47 species
Azfi_s0373.g067169 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=299-2836 0.03 OrthoFinder output from all 47 species
Ceric.03G046500.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g03175 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02338 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024723001 PUB44, SAUL1, ATPUB44 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Gb_23646 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g45420.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g17900.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
MA_99491g0010 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Mp8g11800.1 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase (PUB) 0.06 OrthoFinder output from all 47 species
Pnu_g13486 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35802 No alias E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g082570.3.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 907 939
IPR003613 Ubox_domain 261 335
No external refs found!