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  5. Sacu_v1.1_s0144.g022941

Sacu_v1.1_s0144.g022941 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1

Description : programmed cell death metacaspase-like regulator *(MCP1) & original description: CDS=1-1197


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0144.g022941

Target Alias Description ECC score Gene Family Method Actions
AT5G64240 AtMC3, MC3 metacaspase 3 0.04 OrthoFinder output from all 47 species
Adi_g006687 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Ceric.29G073300.1 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020675.88 AtMC2, MC2 Multi-process regulation.programmed cell death.MCP1... 0.02 OrthoFinder output from all 47 species
GSVIVT01013843001 ATMC1, LOL3,... Multi-process regulation.programmed cell death.MCP1... 0.04 OrthoFinder output from all 47 species
Mp7g17040.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Msp_g37574 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
Pir_g10171 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Ppi_g05686 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.02 OrthoFinder output from all 47 species
Solyc03g094160.3.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Zm00001e001876_P001 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Zm00001e002382_P001 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019211 phosphatase activator activity IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 6 31
No external refs found!