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Description : not classified & original description: CDS=20-451
Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0142.g022803 | |
| Cluster | HCCA: Cluster_20 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00085p00165180 | KNAT6, KNAT6L,... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G62360 | BUM1, SHL, STM,... | KNOX/ELK homeobox transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g019966 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g060986 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21136 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15588 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene56442.t2 | KNAT3, Aspi01Gene56442 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05224 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g27227 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g19694.1 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g03164.2 | KNAT7, IXR11,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g51710.1 | BP, BP1, KNAT1,... | transcription factor (KNOX) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g56773 | KNAT3 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g31849 | HDG4 | BEL-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34501 | KNAT3 | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10499 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0115.g020964 | BUM1, SHL, STM,... | KNOX-type transcription factor & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g01264 | No alias | KNOX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27266 | No alias | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36645 | No alias | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g081120.4.1 | BUM1, SHL, STM,... | transcription factor (KNOX) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g47800 | KNAT4 | KNOX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027562_P001 | KNAT6, KNAT6L,... | transcription factor (KNOX) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e039044_P001 | KNAT7, IXR11,... | transcription factor (KNOX) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0005047 | signal recognition particle binding | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| CC | GO:0005785 | signal recognition particle receptor complex | IEP | HCCA |
| BP | GO:0006605 | protein targeting | IEP | HCCA |
| BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0051668 | localization within membrane | IEP | HCCA |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |