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  5. Sacu_v1.1_s0140.g022678

Sacu_v1.1_s0140.g022678


Description : not classified & original description: CDS=682-1350


Gene families : OG0007302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0140.g022678

Target Alias Description ECC score Gene Family Method Actions
AT2G44920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g00799 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene24909.t1 Aspi01Gene24909 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G001200.1 Ceric.01G001200 not classified & original description: pacid=50590454... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.57 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dde_g13753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g05080.1 LOC_Os01g05080 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g19840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10232509g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_503287g0010 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp7g06080.1 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Msp_g18312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo76876 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Tin_g14674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025798_P001 Zm00001e025798 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 134 171
No external refs found!