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  5. Sacu_v1.1_s0139.g022600

Sacu_v1.1_s0139.g022600 (UGE5)


Aliases : UGE5

Description : EC_5.1 racemase or epimerase & original description: CDS=453-1574


Gene families : OG0000465 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000465_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0139.g022600
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT5G44480 DUR NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g01852 UGE2, ATUGE2 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17232 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06653 MUR4, UXE1, HSR8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12017.t1 UGE2, ATUGE2,... EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02322 UGE2, ATUGE2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g52730.1 MUR4, UXE1,... UDP-D-xylose 4-epimerase 0.03 OrthoFinder output from all 47 species
Mp7g08810.1 UGE5 UDP-D-glucose 4-epimerase 0.02 OrthoFinder output from all 47 species
Nbi_g11388 UGE5 EC_5.1 racemase or epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17023 No alias EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g055930.3.1 UGE2, ATUGE2,... UDP-D-glucose 4-epimerase 0.03 OrthoFinder output from all 47 species
Spa_g04491 UGE5 EC_5.1 racemase or epimerase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 75 340
No external refs found!