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  5. Cpa|evm.model.tig00021721.27

Cpa|evm.model.tig00021721.27


Description : 29.3.1 protein.targeting.nucleus Encodes importin alpha involved in nuclear import. AT-IMP


Gene families : OG_01_0000716 (Gene family) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00021721.27
Cluster HCCA cluster: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT3G06720 IMPA-1, IMPA1,... importin alpha isoform 1 0.02 Gene family
AT4G16143 IMPA-2 importin alpha isoform 2 0.02 Gene family
Cre04.g215850 No alias 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.02 Gene family
GSVIVT01028079001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.02 Gene family
GSVIVT01035047001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.04 Gene family
Smo266556 PACid_15409102 No description available 0.01 Gene family
Zm00001d008345 GRMZM2G088231 29.3.1 protein.targeting.nucleus Protein interacts with... 0.02 Gene family
Zm00001d009850 GRMZM2G088088 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.03 Gene family
Zm00001d037606 GRMZM2G009845 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.01 Gene family
Zm00001d040274 GRMZM2G091119 29.3.1 protein.targeting.nucleus Protein interacts with... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002652 Importin-a_IBB 9 89
IPR000225 Armadillo 351 390
IPR000225 Armadillo 268 306
IPR000225 Armadillo 183 224
IPR000225 Armadillo 310 349
IPR000225 Armadillo 232 265
IPR000225 Armadillo 142 180
IPR000225 Armadillo 394 431
IPR000225 Armadillo 100 139
IPR032413 Arm_3 447 493
No external refs found!