MA_10430437g0020


Description : Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana (sp|q9fvx2|pp129_arath : 252.0)


Gene families : OG_01_0000152 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000152_tree ,
OG_02_0002310 (LandPlants) Phylogenetic Tree(s): OG_02_0002310_tree ,
OG_03_0001345 (SeedPlants) Phylogenetic Tree(s): OG_03_0001345_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430437g0020
Cluster HCCA: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00019400 No alias Pentatricopeptide repeat-containing protein At5g11310,... 0.04 Archaeplastida
AMTR_s00105p00044870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g71060,... 0.02 Archaeplastida
Gb_13617 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.04 Archaeplastida
Gb_21594 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.02 Archaeplastida
Gb_31784 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.02 Archaeplastida
LOC_Os02g48122.1 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 Archaeplastida
LOC_Os03g53490.1 No alias Pentatricopeptide repeat-containing protein At3g22670,... 0.02 Archaeplastida
LOC_Os09g37070.1 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.04 Archaeplastida
Solyc03g112560.4.1 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.03 Archaeplastida
Solyc04g081950.4.1 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.03 Archaeplastida
Zm00001e007565_P002 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 Archaeplastida
Zm00001e015617_P001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.05 Archaeplastida
LOC_Os02g48122.1 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 LandPlants
Zm00001e007565_P002 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 LandPlants
Zm00001e015617_P001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.05 LandPlants
LOC_Os02g48122.1 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 SeedPlants
Zm00001e007565_P002 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 SeedPlants
Zm00001e015617_P001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 275 304
IPR002885 Pentatricopeptide_repeat 310 335
IPR002885 Pentatricopeptide_repeat 381 410
IPR002885 Pentatricopeptide_repeat 555 581
IPR002885 Pentatricopeptide_repeat 447 495
No external refs found!