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  5. Sacu_v1.1_s0134.g022293

Sacu_v1.1_s0134.g022293 (SNP33, SNAP33,...)


Aliases : SNP33, SNAP33, ATSNAP33B, ATSNAP33

Description : Qbc-type SNAP25-group component of SNARE membrane fusion complex & original description: CDS=1-972


Gene families : OG0002168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002168_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0134.g022293
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Gb_30352 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.02 OrthoFinder output from all 47 species
Lfl_g24955 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
MA_136883g0010 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.03 OrthoFinder output from all 47 species
Msp_g24472 SNP33, SNAP33,... Qbc-type SNAP25-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Zm00001e000832_P001 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.03 OrthoFinder output from all 47 species
Zm00001e033374_P002 SNP33, SNAP33,... SNAP25 group Qbc-type SNARE protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!