Solyc10g008070.3.1 (Solyc10g008070.3)


Aliases : Solyc10g008070.3

Description : 27.3.52 RNA.regulation of transcription.Global transcription factor group This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation. global transcription factor group E4 (GTE4)


Gene families : OG_01_0000231 (Gene family) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g008070.3.1
Cluster HCCA cluster: Cluster_270

Target Alias Description ECC score Gene Family Method Actions
AT1G06230 GTE4 global transcription factor group E4 0.04 Gene family
AT5G10550 GTE2 global transcription factor group E2 0.05 Gene family
AT5G46550 No alias DNA-binding bromodomain-containing protein 0.03 Gene family
AT5G65630 GTE7 global transcription factor group E7 0.02 Gene family
GSVIVT01014233001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.04 Gene family
LOC_Os02g15220 Os02g0250300 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
MA_18020g0010 No alias 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
MA_87057g0010 No alias 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Solyc02g091660.3.1 Solyc02g091660.3 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Zm00001d053427 GRMZM2G004741 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001487 Bromodomain 203 287
IPR027353 NET_dom 324 386
No external refs found!