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  5. Sacu_v1.1_s0133.g022228

Sacu_v1.1_s0133.g022228


Description : component *(uL15) of large ribosomal-subunit (LSU) proteome & original description: CDS=1-435


Gene families : OG0001601 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0133.g022228

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00158350 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT1G23290 RPL27AB, RPL27A Ribosomal protein L18e/L15 superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g102572 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g06147 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cre02.g115200 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01004075001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01007667001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_05659 No alias component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os03g29460.1 LOC_Os03g29460 component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os07g42170.1 RPL27AB, RPL27A,... component RPL27a of LSU proteome component 0.05 OrthoFinder output from all 47 species
Mp1g15440.1 No alias component RPL27a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Mp5g00120.1 No alias component RPL27a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pp3c16_22430V3.1 Pp3c16_22430 Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c20_18830V3.1 Pp3c20_18830 Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c25_13260V3.1 Pp3c25_13260 Ribosomal protein L18e/L15 superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c6_3470V3.1 Pp3c6_3470 Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c8_5770V3.1 Pp3c8_5770 Ribosomal protein L18e/L15 superfamily protein 0.02 OrthoFinder output from all 47 species
Sam_g25032 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g47290 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo165371 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Solyc03g112360.1.1 Solyc03g112360 component RPL27a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Tin_g02964 No alias component *(uL15) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e010753_P001 Zm00001e010753 component RPL27a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e035537_P001 Zm00001e035537 component RPL27a of LSU proteome component 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 28 140
No external refs found!