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  5. Sacu_v1.1_s0132.g022182

Sacu_v1.1_s0132.g022182


Description : not classified & original description: CDS=1-1254


Gene families : OG0002519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002519_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0132.g022182

Target Alias Description ECC score Gene Family Method Actions
AT3G26140 No alias Cellulase (glycosyl hydrolase family 5) protein 0.02 OrthoFinder output from all 47 species
Aob_g33174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71722.t1 Aspi01Gene71722 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47060 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01014355001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01019433001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01019434001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_13276 No alias no description available(sp|c0hla0|gh5fp_chaob : 569.0) 0.03 OrthoFinder output from all 47 species
Gb_20519 No alias no description available(sp|c0hla0|gh5fp_chaob : 178.0) 0.03 OrthoFinder output from all 47 species
Gb_32318 No alias no description available(sp|c0hla0|gh5fp_chaob : 470.0) 0.03 OrthoFinder output from all 47 species
LOC_Os04g40490.1 LOC_Os04g40490 no description available(sp|c0hla0|gh5fp_chaob : 376.0) 0.02 OrthoFinder output from all 47 species
Lfl_g15991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54085 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc05g013810.4.1 Solyc05g013810 no description available(sp|c0hla0|gh5fp_chaob : 86.3) 0.02 OrthoFinder output from all 47 species
Solyc08g081720.4.1 Solyc08g081720 no description available(sp|c0hla0|gh5fp_chaob : 383.0) 0.02 OrthoFinder output from all 47 species
Zm00001e007796_P001 Zm00001e007796 no description available(sp|c0hla0|gh5fp_chaob : 285.0) 0.05 OrthoFinder output from all 47 species
Zm00001e022886_P001 Zm00001e022886 no description available(sp|c0hla0|gh5fp_chaob : 334.0) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!