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  5. Sacu_v1.1_s0132.g022169

Sacu_v1.1_s0132.g022169


Description : not classified & original description: CDS=1-657


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0132.g022169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00172890 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00051710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00223430 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G33480 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G63840 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G42360 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.03 OrthoFinder output from all 47 species
AT5G57750 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g007002 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g118032 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g07665 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09630 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12179 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g12633 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aev_g39979 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Als_g02144 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g03307 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g32159 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g11862 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g13275 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aop_g23371 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g36854 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22449.t1 Aspi01Gene22449 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene27966.t1 Aspi01Gene27966 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36586.t1 Aspi01Gene36586 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42978.t2 Aspi01Gene42978 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene66980.t1 Aspi01Gene66980 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70383.t1 Aspi01Gene70383 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70839.t1 Aspi01Gene70839 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70935.t1 ATL6, Aspi01Gene70935 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0054.g033681 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Cba_g70777 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G098400.1 Ceric.01G098400 not classified & original description: pacid=50591772... 0.03 OrthoFinder output from all 47 species
Ceric.03G066200.1 Ceric.03G066200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.07G058000.1 Ceric.07G058000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.12G015900.1 Ceric.12G015900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.22G020900.1 ATL43, Ceric.22G020900 not classified & original description: pacid=50614198... 0.02 OrthoFinder output from all 47 species
Ceric.22G069000.1 Ceric.22G069000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.29G079200.1 Ceric.29G079200 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Dac_g05542 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g16663 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g00837 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g03665 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07013 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g25638 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g22839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g05398 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g14526 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g26468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g28710 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g30250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_15836 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g11500.1 LOC_Os01g11500 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g20930.1 ATL3, LOC_Os01g20930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g57460.1 LOC_Os02g57460 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g00408 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g10385 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g11806 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g12876 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g39367 RHA3B not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_17390g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
MA_7553g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_80729g0030 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_85088g0010 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Mp6g19130.1 ATL1F no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10125 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g16085 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g07430 BRH1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g16553 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g38146 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40735 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g01265 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g17726 ATL31, CNI1 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g55293 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g03072 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g10849 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ppi_g12248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g21936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019911 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sam_g07697 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g18767 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g39799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Solyc01g100100.4.1 Solyc01g100100 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc04g074820.3.1 Solyc04g074820 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc05g010175.1.1 RHA2A, Solyc05g010175 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g03237 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g08710 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g09498 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g09927 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g10665 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Spa_g11938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17343 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Tin_g01893 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.04 OrthoFinder output from all 47 species
Tin_g12610 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g28275 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e000398_P001 Zm00001e000398 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e009988_P001 ATL6, Zm00001e009988 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e023238_P001 Zm00001e023238 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030930_P001 ATL3, Zm00001e030930 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e032186_P001 RHA3B, Zm00001e032186 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e034421_P001 ATL6, Zm00001e034421 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 185 213
No external refs found!