Sacu_v1.1_s0132.g022151 (PRCGB, PBD1)

Aliases : PRCGB, PBD1

Description : beta-type-4 component *(PBD) of 26S proteasome & original description: CDS=72-707

Gene families : OG0004283 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004283_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0132.g022151
Cluster	HCCA: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00272080	PRCGB, PBD1,...	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Adi_g008050	PRCGB, PBD1	beta-type-4 component *(PBD) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Cre14.g610950	PRCGB, PBD1	Protein degradation.26S proteasome.20S core...	0.02	OrthoFinder output from all 47 species
Dcu_g08528	PRCGB, PBD1	beta-type-4 component *(PBD) of 26S proteasome &...	0.05	OrthoFinder output from all 47 species
Pir_g65663	PRCGB, PBD1	beta-type-4 component *(PBD) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Pp3c20_18180V3.1	PRCGB, PBD1, Pp3c20_18180	20S proteasome beta subunit D1	0.03	OrthoFinder output from all 47 species
Tin_g04912	PRCGB, PBD1	beta-type-4 component *(PBD) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004602	glutathione peroxidase activity	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
CC	GO:0017053	transcription repressor complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	3	182

External Links

No external refs found!