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  5. Sacu_v1.1_s0130.g022074

Sacu_v1.1_s0130.g022074 (AT-GT2, GT2)


Aliases : AT-GT2, GT2

Description : Trihelix-type transcription factor & original description: CDS=412-3018


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0130.g022074
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Aev_g08051 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57836 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G006300.1 Ceric.35G006300 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.36G000200.1 Ceric.36G000200 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
LOC_Os02g01380.1 AT-GT2, GT2,... transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Lfl_g06235 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10433499g0020 AT-GT2, GT2 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
MA_47951g0010 No alias transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Msp_g10228 AT-GT2, GT2 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51431 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 278 364
IPR044822 Myb_DNA-bind_4 635 722
No external refs found!