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  5. Sacu_v1.1_s0130.g022011

Sacu_v1.1_s0130.g022011


Description : RNA editing factor *(MEF14) & original description: CDS=51-1046


Gene families : OG0003511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0130.g022011
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene29680.t1 Aspi01Gene29680 RNA editing factor *(MEF14) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g13638 No alias RNA editing factor *(MEF14) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09690 No alias RNA editing factor *(MEF14) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g00590 No alias RNA editing factor *(MEF14) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g38796 No alias RNA editing factor *(MEF14) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24073 No alias RNA editing factor *(MEF14) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g04763 No alias RNA editing factor *(MEF14) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 272 326
IPR013078 His_Pase_superF_clade-1 68 179
No external refs found!